made the thing (hopefully) locally installable

interview_kernel/README.md → README.md

-**MetaKernel Echo** is a Jupyter kernel using MetaKernel magics, shell, help, and parallel processing tools. This code provides an example MetaKernel kernel.
+**interview_kernel** is a Jupyter kernel using MetaKernel magics.
 
 ## Install
 
-First, you need to install the metakernel_echo library and dependencies:
-
-```shell
-pip install interview_kernel --upgrade
-```
-
-Then, you need to install the metakernel echo kernel spec:
-
+from this directory, run 
 ```shell
-python interview_kernel install
+pip install interview_kernel
+python setup.py install
+cd interview_kernel
+python install.py
 ```
 
 ## Running

interview_kernel/install.py

@@ -17,12 +17,10 @@ def install_my_kernel_spec(user=True, prefix=None):
         os.chmod(td, 0o755) # Starts off as 700, not user readable
         with open(os.path.join(td, 'kernel.json'), 'w') as f:
             json.dump(kernel_json, f, sort_keys=True)
-        # TODO: Copy any resources
         try:
-            # copyfile('./kernel.js', os.path.join(td, 'kernel.js'))
             interview = Interview()
             with open(os.path.join(td, 'kernel.js'), 'w') as f:
-                # javascript code that sets an initial markdown cell
+                # javascript code that sets an initial markdown cell in every new notebook
                 js = """define(['base/js/namespace'], function(Jupyter)
                         {{
                             function onload()

interview_kernel/interview_kernel.py

@@ -13,14 +13,19 @@ from pylatexenc.latex2text import LatexNodes2Text
 import getpass
 from bokeh.io import output_notebook
 
-from pde_state_machine import *
-from string_handling import build_url, get_recursively
+#from . import pde_state_machine
+import pde_state_machine
+#from . import string_handling
+import string_handling
 from distutils.util import strtobool
 
 
 """This is a Jupyter kernel derived from MetaKernel. To use it, install it with the install.py script and run 
 "jupyter notebook --debug --NotebookApp.token='' " from terminal. """
+
+
 class Interview(MetaKernel):
+
     implementation = 'Interview'
     implementation_version = '0.1'
     language = 'text'
@@ -55,7 +60,7 @@ Otherwise, you can always answer with \LaTeX-type input.
 
     def __init__(self, **kwargs):
 
-        self.state_machine = PDE_States(self.poutput, self.update_prompt, self.please_prompt, self.display_html)
+        self.state_machine = pde_state_machine.PDE_States(self.poutput, self.update_prompt, self.please_prompt, self.display_html)
 
         # call superclass constructor
         super(Interview, self).__init__(**kwargs)
@@ -255,7 +260,7 @@ Otherwise, you can always answer with \LaTeX-type input.
             url_args_dict = dict(type="pgraph",
                                  graphdata=self.state_machine.mmtinterface.namespace)
             # if applicable, highlight the ephemeral parts https://github.com/UniFormal/TGView/issues/25
-            thynames = get_recursively(self.state_machine.simdata, "theoryname")
+            thynames = string_handling.get_recursively(self.state_machine.simdata, "theoryname")
             # if thynames:
             #    url_args_dict["highlight"] = ",".join(thynames)
             # for now, highlight the "persistent ephemeral" theories, cf https://github.com/UniFormal/MMT/issues/326
@@ -271,8 +276,8 @@ Otherwise, you can always answer with \LaTeX-type input.
         # have the side bars go away
         url_args_dict["viewOnlyMode"] = "true"
 
-        tgview_url = build_url(server_url, "graphs/tgview.html", args_dict=url_args_dict)
-        #print(tgview_url)
+        tgview_url = string_handling.build_url(server_url, "graphs/tgview.html", args_dict=url_args_dict)
+        # print(tgview_url)
 
         code = """
             <iframe 

interview_kernel/pde_state_machine.py

@@ -249,7 +249,7 @@ class PDE_States:
 
     ##### for state domain
     def domain_begin(self):
-        self.poutput("What is the domain in your model?     Ω : type ❘ = [?;?], e.g. `\\Omega = [0.0;1.0]`")
+        self.poutput("What is the domain in your model?     Ω : type ❘ = [?;?], e.g. `\\\\Omega = [0.0;1.0]`")
         # self.poutput("By the way, you can always try and use LaTeX-type input.")
         self.simdata[self.state]["axes"] = OrderedDict()
         self.domain_mmt_preamble()
@@ -950,6 +950,8 @@ class PDE_States:
 
     def recap(self, userstring=None):  # TODO
         self.print_simdata()
+        self.print_empty_line()
+        self.poutput("You can inspect the persistently loaded MMT theories under " + self.mmtinterface.mmt_base_url)
 
     def print_simdata(self):
         self.poutput("These are the things we know so far about your problem:")

setup.py

@@ -9,7 +9,7 @@ from setuptools import setup
 setup(
     name='interview_kernel',
     version='0.1.0',
-    packages=['interview_kernel', 'interview_kernel/exastencils'],
+    packages=['interview_kernel'],
     url='https://gl.kwarc.info/theresa_pollinger/MoSIS',
     license='MIT',
     author='Theresa Pollinger',
@@ -20,13 +20,12 @@ setup(
     # replicating contents of MANIFEST,
     # cf.https://stackoverflow.com/questions/7522250/how-to-include-package-data-with-setuptools-distribute/14159430#14159430
     package_data={
-        'interview_kernel/exastencils': ['interview_kernel/exastencils/compiler.jar',
+        'interview_kernel': ['interview_kernel/exastencils/compiler.jar',
                                             'interview_kernel/exastencils/generate_compile_and_run_list.sh',
                                             'interview_kernel/exastencils/lib/*.*'],
     },
     zip_safe=False,
     # use_scm_version=True,
     setup_requires=['setuptools_scm'],  # or possibly https://pypi.python.org/pypi/setuptools-git
-    install_requires=['transitions', 'bokeh', 'requests', 'pylatexenc', 'metakernel', 'lxml', 'IPython',
-                      'jupyter_client', 'ipywidgets']
+    install_requires=['transitions', 'bokeh', 'requests', 'pylatexenc', 'metakernel', 'lxml', 'IPython', 'jupyter_client', 'ipywidgets']
 )