Commit 578140a4 authored by Ulrich's avatar Ulrich

reworking the thesis... again

parent 0b2640cb
......@@ -8,7 +8,8 @@
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......@@ -16,35 +17,35 @@
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......@@ -52,7 +53,7 @@
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......@@ -60,259 +61,259 @@
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......@@ -8,7 +8,7 @@
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......@@ -16,7 +16,7 @@
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......@@ -24,7 +24,7 @@
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......@@ -32,7 +32,7 @@
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......@@ -40,7 +40,7 @@
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<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p18.2.m11.1.7.2.cmml" xref="p18.2.m11.1.7.2"><csymbol cd="ambiguous" id="p18.2.m11.1.7.2.1.cmml">superscript</csymbol><cn type="integer" id="p18.2.m11.1.5.cmml" xref="p18.2.m11.1.5">10</cn><cn type="integer" id="p18.2.m11.1.6.1.cmml" xref="p18.2.m11.1.6.1">19</cn></apply><apply><times/><csymbol cd="gauss">G</csymbol><csymbol cd="eV">eV</csymbol></apply></apply></kat:contentmathml>
</rdf:Description>
......@@ -48,7 +48,7 @@
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p19.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.m1.1.6.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.w27'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p19.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.m1.1.6.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.w27'%5D)"/>
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<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p19.1.m1.1.6.1.cmml" xref="p19.1.m1.1.6.1"><csymbol cd="ambiguous" id="p19.1.m1.1.6.1.1.cmml">superscript</csymbol><cn type="integer" id="p19.1.m1.1.4.cmml" xref="p19.1.m1.1.4">10</cn><apply id="p19.1.m1.1.5.1.cmml" xref="p19.1.m1.1.5.1"><minus id="p19.1.m1.1.5.1.3.cmml" xref="p19.1.m1.1.5.1.3"/><cn type="integer" id="p19.1.m1.1.5.1.2.cmml" xref="p19.1.m1.1.5.1.2">13</cn><cn type="integer" id="p19.1.m1.1.5.1.5.cmml" xref="p19.1.m1.1.5.1.5">14</cn></apply></apply><apply><times/><csymbol cd="gauss">G</csymbol><csymbol cd="eV">eV</csymbol></apply></apply></kat:contentmathml>
</rdf:Description>
......@@ -56,49 +56,49 @@
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p19.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.m8.1.10'%5D%2C%2F%2F*%5B%40id%3D'p19.1.w255'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p19.1'%5D%2C%2F%2F*%5B%40id%3D'p19.1.m8.1.10'%5D%2C%2F%2F*%5B%40id%3D'p19.1.w255'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="1"><apply><times/><apply id="p19.1.m8.1.10.cmml" xref="p19.1.m8.1.10"><times id="p19.1.m8.1.6.cmml" xref="p19.1.m8.1.6"/><apply id="p19.1.m8.1.10.1.2.cmml" xref="p19.1.m8.1.10.1"><minus id="p19.1.m8.1.3.cmml" xref="p19.1.m8.1.3"/><cn type="integer" id="p19.1.m8.1.2.cmml" xref="p19.1.m8.1.2">2</cn><cn type="integer" id="p19.1.m8.1.4.cmml" xref="p19.1.m8.1.4">3</cn></apply><apply id="p19.1.m8.1.10.2.cmml" xref="p19.1.m8.1.10.2"><csymbol cd="ambiguous" id="p19.1.m8.1.10.2.1.cmml">superscript</csymbol><cn type="integer" id="p19.1.m8.1.8.cmml" xref="p19.1.m8.1.8">10</cn><apply id="p19.1.m8.1.9.1.cmml" xref="p19.1.m8.1.9.1"><minus id="p19.1.m8.1.9.1.1.cmml" xref="p19.1.m8.1.9.1.1"/><cn type="integer" id="p19.1.m8.1.9.1.2.cmml" xref="p19.1.m8.1.9.1.2">3</cn></apply></apply></apply><apply><times/><csymbol cd="eV">eV</csymbol></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994072707"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p20.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m5.1.7.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.w64'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p20.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m5.1.7.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.w64'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="1"><apply><times/><apply id="p20.2.m5.1.7.2.cmml" xref="p20.2.m5.1.7.2"><csymbol cd="ambiguous" id="p20.2.m5.1.7.2.1.cmml">superscript</csymbol><cn type="integer" id="p20.2.m5.1.5.cmml" xref="p20.2.m5.1.5">10</cn><apply id="p20.2.m5.1.6.1.cmml" xref="p20.2.m5.1.6.1"><minus id="p20.2.m5.1.6.1.1.cmml" xref="p20.2.m5.1.6.1.1"/><cn type="integer" id="p20.2.m5.1.6.1.2.cmml" xref="p20.2.m5.1.6.1.2">2</cn></apply></apply><apply><times/><csymbol cd="eV">eV</csymbol></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994074946"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p20.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m8.1.12.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m9.1'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p20.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m8.1.12.2'%5D%2C%2F%2F*%5B%40id%3D'p20.2.m9.1'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p20.2.m8.1.12.2.cmml" xref="p20.2.m8.1.12.2"><csymbol cd="ambiguous" id="p20.2.m8.1.12.2.1.cmml">superscript</csymbol><cn type="integer" id="p20.2.m8.1.10.cmml" xref="p20.2.m8.1.10">10</cn><apply id="p20.2.m8.1.11.1.cmml" xref="p20.2.m8.1.11.1"><minus id="p20.2.m8.1.11.1.1.cmml" xref="p20.2.m8.1.11.1.1"/><cn type="integer" id="p20.2.m8.1.11.1.2.cmml" xref="p20.2.m8.1.11.1.2">2</cn></apply></apply><apply><times/><apply><power/><csymbol cd="eV">eV</csymbol><cn type="integer" id="p20.2.m9.1.1.1.cmml" xref="p20.2.m9.1.1.1">2</cn></apply></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994077260"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m6.1.29'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p5.1.m6.1.29.2.4.2.cmml" xref="p5.1.m6.1.29"><times id="p5.1.m6.1.21.cmml" xref="p5.1.m6.1.21"/><apply id="p5.1.m6.1.29.2.4.2.1.2.cmml" xref="p5.1.m6.1.29.2.4.2.1"><minus id="p5.1.m6.1.18.cmml" xref="p5.1.m6.1.18"/><cn type="float" id="p5.1.m6.1.17.cmml" xref="p5.1.m6.1.17">0.5</cn><cn type="integer" id="p5.1.m6.1.19.cmml" xref="p5.1.m6.1.19">6</cn></apply><apply id="p5.1.m6.1.29.2.4.2.2.cmml" xref="p5.1.m6.1.29"><csymbol cd="ambiguous" id="p5.1.m6.1.29.2.4.2.2.1.cmml">superscript</csymbol><cn type="integer" id="p5.1.m6.1.23.cmml" xref="p5.1.m6.1.23">10</cn><apply id="p5.1.m6.1.24.1.cmml" xref="p5.1.m6.1.29"><minus id="p5.1.m6.1.24.1.1.cmml" xref="p5.1.m6.1.24.1.1"/><cn type="integer" id="p5.1.m6.1.24.1.2.cmml" xref="p5.1.m6.1.24.1.2">3</cn></apply></apply></apply><apply><times/><apply><power/><csymbol cd="eV">eV</csymbol><cn type="integer" id="p5.1.m6.1.27.1.cmml" xref="p5.1.m6.1.27.1">2</cn></apply></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994079975"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m11.1.31'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p5.1.m11.1.31.2.4.2.cmml" xref="p5.1.m11.1.31"><times id="p5.1.m11.1.23.cmml" xref="p5.1.m11.1.23"/><apply id="p5.1.m11.1.31.2.4.2.1.2.cmml" xref="p5.1.m11.1.31.2.4.2.1"><minus id="p5.1.m11.1.18.cmml" xref="p5.1.m11.1.18"/><cn type="float" id="p5.1.m11.1.17.cmml" xref="p5.1.m11.1.17">0.3</cn><cn type="float" id="p5.1.m11.1.21.cmml" xref="p5.1.m11.1.21">1.2</cn></apply><apply id="p5.1.m11.1.31.2.4.2.2.cmml" xref="p5.1.m11.1.31"><csymbol cd="ambiguous" id="p5.1.m11.1.31.2.4.2.2.1.cmml">superscript</csymbol><cn type="integer" id="p5.1.m11.1.25.cmml" xref="p5.1.m11.1.25">10</cn><apply id="p5.1.m11.1.26.1.cmml" xref="p5.1.m11.1.31"><minus id="p5.1.m11.1.26.1.1.cmml" xref="p5.1.m11.1.26.1.1"/><cn type="integer" id="p5.1.m11.1.26.1.2.cmml" xref="p5.1.m11.1.26.1.2">5</cn></apply></apply></apply><apply><times/><apply><power/><csymbol cd="eV">eV</csymbol><cn type="integer" id="p5.1.m11.1.29.1.cmml" xref="p5.1.m11.1.29.1">2</cn></apply></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994082112"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m18.1.46'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p5.1.m18.1.46.2.5.2.cmml" xref="p5.1.m18.1.46"><csymbol cd="ambiguous" id="p5.1.m18.1.46.2.5.2.1.cmml">superscript</csymbol><cn type="integer" id="p5.1.m18.1.40.cmml" xref="p5.1.m18.1.40">10</cn><apply id="p5.1.m18.1.41.1.cmml" xref="p5.1.m18.1.46"><minus id="p5.1.m18.1.41.1.1.cmml" xref="p5.1.m18.1.41.1.1"/><cn type="integer" id="p5.1.m18.1.41.1.2.cmml" xref="p5.1.m18.1.41.1.2">2</cn></apply></apply><apply><times/><apply><power/><csymbol cd="eV">eV</csymbol><cn type="integer" id="p5.1.m18.1.44.1.cmml" xref="p5.1.m18.1.44.1">2</cn></apply></apply></apply></kat:contentmathml>
</rdf:Description>
<rdf:Description rdf:nodeID="KAT_38994084237"><kat:run rdf:nodeID="kat_run"/>
<kat:kannspec rdf:nodeID="KAT_1_QuantityExpression"/>
<kat:concept>QuantityExpression</kat:concept>
<kat:type rdf:resource="http://kwarc.info/semanticextraction/KAnnSpec#quantityexpression"/>
<kat:annotates rdf:resource="http://localhost/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4.2'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4.3'%5D)"/>
<kat:annotates rdf:resource="http://localhost:3000/content/hep-ph9807466.html#cse(%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4.2'%5D%2C%2F%2F*%5B%40id%3D'p5.1.m20.1.24.4.3'%5D)"/>
<kat:contentmathml rdf:parseType="Literal" score="0.5"><apply><times/><apply id="p5.1.m20.1.24.4.2.2.cmml" xref="p5.1.m20.1.24.4.2"><minus id="p5.1.m20.1.18.cmml" xref="p5.1.m20.1.18"/><cn type="float" id="p5.1.m20.1.17.cmml" xref="p5.1.m20.1.17">0.2</cn><cn type="integer" id="p5.1.m20.1.19.cmml" xref="p5.1.m20.1.19">2</cn></apply><apply><times/><apply><power/><csymbol cd="eV">eV</csymbol><cn type="integer" id="p5.1.m20.1.23.1.cmml" xref="p5.1.m20.1.23.1">2</cn></apply></apply></apply></kat:contentmathml>
</rdf:Description>
</rdf:RDF>
......@@ -91,6 +91,7 @@ pub fn main() {
}
pub fn read_document(document_path : String, annotation_location : &str, config : &Config){
println!("document {}", document_path);
let parser = Parser::default();
let opt_doc = parser.parse_file(annotation_location);
if opt_doc.is_err(){
......
......@@ -46,14 +46,23 @@ It consists of three disjoint parts, where the first one is a small but importan
Quantity expressions are spotted as a second step. The results are stored
as separate annotations which contain references to the documents.
Rating the likelihood of the annotations is a subtask of this step. This is especially relevant, when there is more than one annotation -- this means more than one possible meaning -- for an expression. We will refer to a program as \textit{spotter}, if it creates annotations from the document. In addition to that, we will call a program
Rating the likelihood of the annotations is a subtask of this step.
This is especially relevant, when there is more than one annotation -- this means more than one possible meaning -- for an expression.
In our experiments, we found up to BLA meanings for an annotation. However, the average during our evaluations is BLA meanings per annotation.
We will refer to a program as \textit{spotter}, if it creates annotations from the document.
In addition to that, we will call a program
\textit{scorer}, when it is working on existing annotations and manipulates their value of likelihood.
As an example, say, a spotter finds \mq{5 GHz} and infers \mq{5 Gigahertz} and
\mq{5 Gauß~$\cdot$~Hertz} as possible meanings. Adding a preference to these two meanings is then a task for the scorer which
adds a higher value of likelihood to the first meaning.
The architecture permits multiple spotting and scoring routines and can easily be extended by additional ones.
Semantic services are based on the documents and their annotations and form the
last part.
The structure of this section follows the structure of the architecture. We thus first describe the preprocessing (Section~\ref{ssec:tokenization}), then the spotting and scoring of quantity expressions including the output format (Section~\ref{ssec:spotting}) and at the end the semantic services (Section~\ref{ssec:implunitconv} to~\ref{ssec:implharvest}).
The structure of this section follows the structure of the architecture. We thus first describe the preprocessing (Section~\ref{ssec:tokenization}) and then the spotting and scoring of quantity expressions including the output format (Section~\ref{ssec:spotting}).
%and at the end the semantic services (Section~\ref{ssec:implunitconv} to~\ref{ssec:implharvest}).
......@@ -87,7 +96,7 @@ math and text mode. There is only one format for text,
but there are three different formats for math in MathML, namely
presentation MathML, content MathML and the original LaTeX source.
The author found that using the representation in content MathML
turned out to be the most general approach, even though the
turned out to be the most general approach, even though the LaTeXML
conversion to this format is still experimental.
In this section, we first show the XML representation of some
......@@ -110,10 +119,10 @@ is most of the implementation.
\subsubsection{XML Representation of Quantity Expressions}
\label{sssec:QEXML}
Showing the XML representation of all example from Section~\ref{sec:goal},
Showing the XML representation of all examples from Section~\ref{sec:goal},
would result in a large and quite redundant enumeration.
Instead we only show a small subset of them and display only the content MathML
part of MathML, since only this part is used for the implementation.
part, since only this part is used for the implementation.
We also omit attributes to increase readability.
The examples in Figure~\ref{fig:first} are from the category of simple multiplicative units,
......@@ -122,7 +131,13 @@ In both tables, the examples on the left side are completely in math mode and th
are partly in math and partly in text mode. In the latter table, we see that the way
superscripts are encoded is totally different, depending on whether the expression is purely in math mode
or not.
Additionally Figure~\ref{fig:third} shows an example where the unit itself is in superscript.
Additionally Figure~\ref{fig:third} shows the encoding of the example \mq{$30^\circ$} where the unit itself is in superscript.
It is interesting to observe that the degree symbol is falsely encoded using the \inline{compose} element which is indented
to represent function composition.
A correct representation involves \ednote{finish this sentence}.
However, even though the markup does not represent the semantic of the expression, the correct meaning can still be
extracted from it.
We will refer to these examples again when we describe the spotting routine in the next section.
\begin{figure}
......@@ -136,7 +151,7 @@ We will refer to these examples again when we describe the spotting routine in t
\lstinputlisting[language=XML]{xml/second.xml}
\end{subfigure}
\end{mdframed}
\caption{The XML representation of Example 4 ($6\;\si{\micro\meter}$) and 6 (200 $\si{\micro}$m) from Table~\ref{tab:simpmutcat}.}
\caption{The XML representation of Example 4 (\mq{$6\;\si{\micro\meter}$}) and 6 (\mq{200 $\si{\micro}$m}) from Table~\ref{tab:simpmutcat}.}
\label{fig:first}
\end{figure}
......@@ -151,14 +166,14 @@ We will refer to these examples again when we describe the spotting routine in t
\lstinputlisting[language=XML]{xml/fourth.xml}
\end{subfigure}
\end{mdframed}
\caption{The XML representation of Example 2 ($1.0\;\rm Wcm^{-2} \si{\micro\meter}^2$) and 5 ($100$ km s$^{-1}$ Mpc$^{-1}$) from Table~\ref{tab:complexcat}.}
\caption{The XML representation of Example 2 (\mq{$1.0\;\rm Wcm^{-2} \si{\micro\meter}^2$}) and 5 (\mq{$100$ km s$^{-1}$ Mpc$^{-1}$}) from Table~\ref{tab:complexcat}.}